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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11184415 chr1:105577453 C/T NME2P1 chr12:120720106-120720519:+ -0.31 -5.98 5.15E-9 Box Plot
BLCA rs11187529 chr10:95343779 A/G CAMK2N1 chr1:20808884-20812713:- -0.5 -6.19 1.58E-9 Box Plot
BLCA rs11188138 chr10:96775993 C/T ZNF276 chr16:89786808-89807311:+ 0.26 6 4.52E-9 Box Plot
BLCA rs111903314 chr9:203568 C/G KRTAP3-3 chr17:39149682-39150385:- 0.23 6.05 3.39E-9 Box Plot
BLCA rs11195823 chr10:113880950 A/G TIAL1 chr10:121331314-121356541:- -0.77 -6.35 5.94E-10 Box Plot
BLCA rs111963585 chr1:35833082 G/A KRTAP13-1 chr21:31768392-31769140:+ 0.17 6 4.7E-9 Box Plot
BLCA rs112016504 chr10:52139877 A/C CDH15 chr16:89238175-89261900:+ 0.45 5.99 4.89E-9 Box Plot
BLCA rs1120526 chr4:167098743 A/G LOC100130932 chr19:14599758-14600688:+ 0.37 6.62 1.25E-10 Box Plot
BLCA rs1120526 chr4:167098743 A/G RPL13AP3 chr14:56232895-56234435:+ 0.34 6.45 3.32E-10 Box Plot
BLCA rs1120526 chr4:167098743 A/G RPL19P12 chr7:102781796-102782386:- 0.36 6.21 1.42E-9 Box Plot
BLCA rs11213438 chr11:110365144 A/G ALG9 chr11:111652919-111742305:- 0.94 6.29 8.51E-10 Box Plot
BLCA rs11213438 chr11:110365144 A/G BUD13 chr11:116618886-116643704:- 0.86 6.07 3.02E-9 Box Plot
BLCA rs11213438 chr11:110365144 A/G C11orf57 chr11:111944810-111955874:+ 0.97 6.77 4.71E-11 Box Plot
BLCA rs11213438 chr11:110365144 A/G CEP164 chr11:117185273-117283984:+ 1.06 7.86 4.05E-14 Box Plot
BLCA rs11213438 chr11:110365144 A/G CWF19L2 chr11:107197071-107328570:- 0.89 6.05 3.36E-9 Box Plot